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Stereochemistry in Organic Chemistry: Alkenes, Cyclic & Linear Alkanes, Slides of Stereochemistry

Examples and guidelines for correctly representing stereochemistry in organic chemistry, focusing on alkenes, cyclic alkanes, and linear alkanes. It explains the importance of trigonal planar geometry for carbons in double bonds, the concept of cis and trans isomers, and the use of dashes and wedges to indicate the relative positions of substituents above or below the plane of the ring in cyclic alkanes. It also introduces the concept of axial and equatorial substituents in chair cyclohexanes and fischer projections.

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2021/2022

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STEREOCHEMICAL REPRESENTATION
Stereochemistry is an important aspect of Organic Chemistry and you must be able to draw structures
which clearly indicate the stereochemical orientation of the various groups on a molecule. For any given
compound there will be a right way and many wrong ways to indicate stereochemistry. This handout
gives examples of the correct way to show stereochemistry for alkenes and for cyclic and acyclic
alkanes. Incorrect examples are also given to illustrate what is not acceptable.
ALKENES: Alkenes contain a carbon-carbon double bond. The carbons are sp2 hybridized, therefore
the geometry at those carbons is trigonal planar: all three substitutents attached to a carbon in a double
bond lie in the same plane and are approximately 120˚ apart from each other. Substituents are either cis
or Z (same side) or trans or E (opposite side) to each other. You cannot draw an alkene in a linear form
and say the groups are cis or trans---it must be drawn correctly.
Correct Incorrect
trans
E
cis
Z
H
H
CH3CHCHCH3---cis
all groups are in the same plane- you don't need
to use dashes and wedges on alkenes unless you are
making a special point about the faces of the alkene
top face
bottom face
CYCLIC ALKANES: Substituents on a cyclic alkane can be either cis or trans to each other. You
should draw the ring in the plane of the paper (solid lines) and use dashes and wedges to show whether
substitutents are above or below the plane of the ring.
Correct Incorrect
cis trans
On occassion you may wish to distinguish the faces of a cycloalkane.
top face
bottom face
a
b
a
b
bb
b
a a
a
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STEREOCHEMICAL REPRESENTATION

Stereochemistry is an important aspect of Organic Chemistry and you must be able to draw structures

which clearly indicate the stereochemical orientation of the various groups on a molecule. For any given

compound there will be a right way and many wrong ways to indicate stereochemistry. This handout

gives examples of the correct way to show stereochemistry for alkenes and for cyclic and acyclic

alkanes. Incorrect examples are also given to illustrate what is not acceptable.

ALKENES: Alkenes contain a carbon-carbon double bond. The carbons are sp2 hybridized, therefore

the geometry at those carbons is trigonal planar: all three substitutents attached to a carbon in a double

bond lie in the same plane and are approximately 120˚ apart from each other. Substituents are either cis

or Z (same side) or trans or E (opposite side) to each other. You cannot draw an alkene in a linear form

and say the groups are cis or trans---it must be drawn correctly.

Correct Incorrect

trans

E

cis

Z

H

H

CH 3 CHCHCH 3 ---cis

all groups are in the same plane- you don't need to use dashes and wedges on alkenes unless you are making a special point about the faces of the alkene

top face

bottom face

CYCLIC ALKANES: Substituents on a cyclic alkane can be either cis or trans to each other. You

should draw the ring in the plane of the paper (solid lines) and use dashes and wedges to show whether

substitutents are above or below the plane of the ring.

Correct Incorrect

cis trans

On occassion you may wish to distinguish the faces of a cycloalkane.

top face

bottom face

a

b

a

b b b

b a a

a

CYCLOHEXANE: For cyclohexanes you may be asked to draw a chair, in which case all substituents

must be either axial or equatorial. The following is the correct way to draw chair cyclohexane. Note

how the axial and equitorial substituents off each carbon are represented.

a

a

e

e

a

a

e

e

a

e

a

e

Disubstituted chair cyclohexanes:

Correct Incorrect

trans trans cis

trans cis cis

trans trans cis

LINEAR ALKANES: You should draw the backbone in the plane of the paper, and draw substituents

either coming towards you (with wedges) or going away from you (with dashes). Note that each carbon

should look like a tetrahedron.

Correct Incorrect

Cl

Cl

Cl

Cl

OH OH

OH OH

Br

Br Br

Br

It is also acceptable to represent acyclic structure as Fischer Projections. 2R,3R-tartaric acid can be

drawn in the forms below. Familiarize yourself with these representations.

HO 2 C

CO 2 H

OH

R

R

CO 2 H

CO 2 H

H OH

HO H

CO 2 H

CO 2 H

H OH

HO H

Fischer Projection

OH