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Cell and DNA Extraction Lab - Human Biology | BIO 9, Lab Reports of Human Biology

Material Type: Lab; Professor: Lopipero-Langmo; Class: Human Biology; Subject: Biology; University: City College of San Francisco; Term: Unknown 1989;

Typology: Lab Reports

Pre 2010

Uploaded on 08/19/2009

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Biology 9
Cell and DNA Extraction Lab
Objectives
To identify some of the structures of the cell from microscopic examination.
To understand the parts of the student microscope, its use, and care.
To learn how to prepare slides of living cells for observation under the microscope.
To accurately follow a protocol and become familiar with lab procedures for extracting DNA
Part 1: Microscopic examination of the cells using the micrographs listed below
Set 58 Cell Structure
1. Cork: The first thing ever viewed under a microscope by Monk Robert Hook in the 17th century.
2. Onion skin: Note the cell wall at A, the cytoplasm at B, the nucleus at C, and plasma membrane at D
3. Skip.
4. Cheek cells: Note the cytoplasm, nucleus, and plasma membrane.
5. Blood cells: Note the absence of nuclei in the red blood cells (most predominant cell type) and the
two types of white blood cells.
6. Nerve cell: Note the cell body, dendrites, and axons.
Name a structure observed in onion epidermal cells that is NOT present in human epithelial cells (e.g.,
cheek cells)?
_____________________________________________________________________________________
Set 66 The Ultra-Structure of Animal Cells
1. Oil gland cells (400X): Even under “high” power our lab microscopes are unable to give us much
detail on cytoplasmic organelles.
2. Plasma cell (37,000X): Crank up the magnification with an electron microscope and organelles
become visible. Note ribosomes on the rough endplasmic reticulum at O, the Golgi body at G,
mitochondrion at I, and nuclear pore at P. These structures are also in the oil gland cell. You just could
not see them at 400X.
3. Cell membrane (400,000X): Check out that bi-layer!
4. Skip.
5. Mitochondrion (124,000X): A close-up of half a mitochondrion. The cristae (inner folds) are
readily visible. Note its double membrane.
6. Centriole (175,000X): Note the network of microtubules.
Sketch the membrane of a cell in the space below.
Label the charged (polar) and uncharged (nonpolar) regions of the phospholipids within the lipid
bilayer.
Name a substance that can be found embedded in the cell membrane.
_______________________________________________________________________________
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Biology 9 Cell and DNA Extraction Lab Objectives

  • To identify some of the structures of the cell from microscopic examination.
  • To understand the parts of the student microscope, its use, and care.
  • To learn how to prepare slides of living cells for observation under the microscope.
  • To accurately follow a protocol and become familiar with lab procedures for extracting DNA Part 1: Microscopic examination of the cells using the micrographs listed below Set 58 Cell Structure
  1. Cork: The first thing ever viewed under a microscope by Monk Robert Hook in the 17 th^ century.
  2. Onion skin: Note the cell wall at A, the cytoplasm at B, the nucleus at C, and plasma membrane at D
  3. Skip.
  4. Cheek cells: Note the cytoplasm, nucleus, and plasma membrane.
  5. Blood cells: Note the absence of nuclei in the red blood cells (most predominant cell type) and the two types of white blood cells.
  6. Nerve cell: Note the cell body, dendrites, and axons. Name a structure observed in onion epidermal cells that is NOT present in human epithelial cells (e.g., cheek cells)?

Set 66 The Ultra-Structure of Animal Cells

  1. Oil gland cells (400X): Even under “high” power our lab microscopes are unable to give us much detail on cytoplasmic organelles.
  2. Plasma cell (37,000X): Crank up the magnification with an electron microscope and organelles become visible. Note ribosomes on the rough endplasmic reticulum at O, the Golgi body at G, mitochondrion at I, and nuclear pore at P. These structures are also in the oil gland cell. You just could not see them at 400X.
  3. Cell membrane ( 400 ,000X): Check out that bi-layer!
  4. Skip.
  5. Mitochondrion (124,000X): A close-up of half a mitochondrion. The cristae (inner folds) are readily visible. Note its double membrane.
  6. Centriole (175,000X): Note the network of microtubules. Sketch the membrane of a cell in the space below.
  • Label the charged (polar) and uncharged (nonpolar) regions of the phospholipids within the lipid bilayer.
  • Name a substance that can be found embedded in the cell membrane.

  • Name ONE substance that can pass freely through the membrane’s lipid bilayer and ONE that can pass only via a carrier. State why the selected substances can or cannot pass without assistance. Part 2: DNA extraction Background: Scientists use the scientific method to observe and ask questions, develop and test hypotheses, and draw conclusions that form the basis of further experimentation. In order to carry out this work, scientists have an extensive “toolbox” for performing experiments. The “tools” in a scientists’ toolbox depend on the type of studies they are performing and their goals. The microscope is one commonly used tool of biologists. Pipettemen are tools that make measuring small volumes of liquid simple but accurate. Other tools are standard procedures to obtain materials needed for future studies. DNA (deoxyribonucleic acid) is the molecule that carries genetic information and is needed for many studies in both animal model research and human subject research. Obtaining DNA for study is, as you will see, quite simple. Materials Gatorade Cup 15ml conical tube (with 2 .5ml Lysis Buffer already inside) 95% Ethanol 1000 !l pipette man (one per table) 1000 !l Pipette tips (one box per table) Wooden stick/plastic stick Microcentrifuge tube (optional) Note that the cup, tube with cap, pipette tip, wooden/plastic sticks go in the biohazard bag. Paper towels from handwashing do not. Procedure
  1. The following procedure will permit you to collect some of the epithelial cells that line the inside of your mouth. These cells are continuously being sloughed off of the inside lining of your cheeks. Swish 5ml (a very small amount) of Gatorade or salt solution in your mouth for 30 seconds. This amount of swishing will actually become quite laborious - - hang in there! DO NOT USE MORE THAN ~ 5 ml.
  2. Spit the Gatorade into your cup. Pour this into a 1 5ml conical tube containing 2. 5 ml lysis buffer. This buffer is a solution containing salt and dishwashing liquid. The dishwashing liquid will dissolve the membrane of the cell, just like dishwashing detergent dissolves fats and proteins from a greasy pan, because the cell and nuclear membranes are composed of fats and proteins. Dissolving the membranes results in the release of the DNA.
  3. Cap the tube and gently rock it, DO NOT SHAKE it, on its side for 2 - 3 minutes. The detergent will break open the cell membrane to release the DNA into the soap solution. Do not be too vigorous while mixing! DNA is a very long molecule. Physical abuse can break it into smaller fragments, a process known as shearing.
  4. Open and slightly tilt the tube and pour ~2. 5 ml of the chilled 95 percent ethanol down the side of the tube so that it forms a layer on the top of your soapy solution. You will use the micropipette to deliver the ethanol in 820 !l increments, three times.
  5. Allow the tube to stand for 1 minute.

Part 4: Identify the structure and function of various cell organelles Label the cell parts in the figure below using the following terms: cell membrane, centrosome, cytoplasm, Golgi body, lysosome, mitochondrion, nucleolus, nucleus, nuclear membrane, ribosomes, rough endoplasmic reticulum (rough ER), smooth endoplasmic reticulum (smooth ER), vesicle Match the functions with the corresponding organelle by writing the letter next to the anatomical term in the figure below. A. control of cell function B. regulates inflow and outflow of materials into the cell C. energy production D. cellular digestion E. cellular storage F. ribosomal RNA synthesis G. studded with ribosomes; modification of proteins H. protein synthesis I. production of phospholipids; detoxification J. jelly like material in which the organelles are located K. produces membranes; involved in packaging and transport of substances for export from the cell L. produces microtubules for cell division M. regulate inflow and outflow of materials into the nucleus